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SRX24070050: Profiling of bacterial communities of secondary sludge of pulp paper mill
1 ILLUMINA (Illumina MiSeq) run: 124,376 spots, 60.2M bases, 39Mb downloads

Design: Amplicon library was prepared using Nextera XT index Kit (illumina Inc.)
Submitted by: Central University of Rajasthan, Rajasthan
Study: Profiling of bacterial communities grown in secondary sludge of pulp paper mill
show Abstracthide Abstract
The current study involved the collection of sludge from the effluent treatment plant of a pulp paper mill. Bacterial communities within the sludge were analyzed using high-throughput sequencing, specifically targeting the hypervariable region of the 16S rRNA genes through the Illumina MiSeq platform. A total of 2520 operational taxonomic units (OUT) were identified from 124376 high-quality sequence reads. Taxonomic analysis revealed that Proteobacteria was the most abundant phylum in the sludge, comprising 44.54% of the total bacterial sequences. Other predominant phyla included Bacteroidetes (13.27%), Actinobacteria (8.81%), Planctomycetes (6.23%), Chloroflexi (5.82%), Actinobacteria (5.24%), and Verrucomicrobia (4.1%). These findings highlight the microbial composition in this highly contaminated environment. Moreover, the study suggests that untreated discharge of sludge poses significant environmental risks and could lead to severe health consequences upon exposure to living beings.
Sample: Profiling of bacterial communities from secondary sludge of pulp paper mill by metagenomics approach
SAMN40571494 • SRS20860574 • All experiments • All runs
Library:
Name: PPS
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 124,376 spots, 60.2M bases, 39Mb
Run# of Spots# of BasesSizePublished
SRR28467073124,37660.2M39Mb2024-03-27

ID:
32377490

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